From bfa3fbfc574dbcc4c77f696651cdf838312fd583 Mon Sep 17 00:00:00 2001 From: egrace479 Date: Fri, 12 Dec 2025 19:17:15 -0500 Subject: [PATCH 1/6] Update to preferred name following Collab Guide [PR 38](https://github.com/Imageomics/Collaborative-distributed-science-guide/pull/38) --- CITATION.cff | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index 5385b29..d968559 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -10,7 +10,7 @@ authors: given-names: Iuliia orcid: "https://orcid.org/0009-0007-1597-8684" - family-names: "Duan" - given-names: "Zoe" + given-names: "Yuehua" orcid: "https://orcid.org/0000-0002-8547-5907" - family-names: Taylor given-names: Graham @@ -52,7 +52,7 @@ references: given-names: Net orcid: "https://orcid.org/0000-0003-2664-451X" - family-names: "Duan" - given-names: "Zoe" + given-names: "Yuehua" orcid: "https://orcid.org/0000-0002-8547-5907" - family-names: "Bradley" given-names: "John" From cf315fa60af3f7d85fdace95ecac11c5b6ff3aef Mon Sep 17 00:00:00 2001 From: egrace479 Date: Fri, 12 Dec 2025 19:19:35 -0500 Subject: [PATCH 2/6] Set for release on Monday version 1.2.0 following Collab Guide update to v1.3.0 --- CITATION.cff | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index d968559..ce8b926 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -16,14 +16,14 @@ authors: given-names: Graham orcid: "https://orcid.org/0000-0001-5867-3652" cff-version: 1.2.0 -date-released: "2025-11-17" +date-released: "2025-12-15" identifiers: - - description: "The GitHub release URL of tag v1.1.0." + - description: "The GitHub release URL of tag v1.2.0." type: url - value: "https://github.com/ABC-Center/ABC-guide/releases/tag/v1.1.0" - - description: "The GitHub URL of the commit tagged with v1.1.0." + value: "https://github.com/ABC-Center/ABC-guide/releases/tag/v1.2.0" + - description: "The GitHub URL of the commit tagged with v1.2.0." type: url - value: "https://github.com/ABC-Center/ABC-guide/tree/2c1e49d012788c5d97a6d17c05e5caa224c17e5a" + value: "https://github.com/ABC-Center/ABC-guide/tree/" # update on release keywords: - "interdisciplinary science" - metadata @@ -39,7 +39,7 @@ license: CC0-1.0 message: "If you find these docs helpful in your research, please cite them as below." repository-code: "https://github.com/ABC-Center/ABC-guide" title: "AI & Biodiversity Change Global Center Guide" -version: "1.1.0" +version: "1.2.0" references: - authors: - family-names: "Campolongo" @@ -66,9 +66,9 @@ references: - family-names: "Lapp" given-names: "Hilmar" orcid: "https://orcid.org/0000-0001-9107-0714" - date-released: "2025-10-29" + date-released: "2025-12-03" license: CC0-1.0 repository-code: "https://github.com/Imageomics/Collaborative-distributed-science-guide" title: "Collaborative Distributed Science Guide" - version: 1.2.1 + version: 1.3.0 doi: "10.5281/zenodo.17210328" From 9db4171c033d2465fa2d12a4ae0b3f117d69ceed Mon Sep 17 00:00:00 2001 From: Elizabeth Campolongo <38985481+egrace479@users.noreply.github.com> Date: Fri, 28 Aug 2026 18:18:14 -0400 Subject: [PATCH 3/6] Set to release on Monday and for newer upstream release --- CITATION.cff | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index ce8b926..f86fce6 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -16,7 +16,7 @@ authors: given-names: Graham orcid: "https://orcid.org/0000-0001-5867-3652" cff-version: 1.2.0 -date-released: "2025-12-15" +date-released: "2026-08-31" identifiers: - description: "The GitHub release URL of tag v1.2.0." type: url @@ -66,9 +66,9 @@ references: - family-names: "Lapp" given-names: "Hilmar" orcid: "https://orcid.org/0000-0001-9107-0714" - date-released: "2025-12-03" + date-released: "2026-07-10" license: CC0-1.0 repository-code: "https://github.com/Imageomics/Collaborative-distributed-science-guide" title: "Collaborative Distributed Science Guide" - version: 1.3.0 + version: 2.0.0 doi: "10.5281/zenodo.17210328" From e3cc56561232e1dd2a1a0b9ca3f6261b25c67780 Mon Sep 17 00:00:00 2001 From: Elizabeth Campolongo <38985481+egrace479@users.noreply.github.com> Date: Fri, 28 Aug 2026 18:25:54 -0400 Subject: [PATCH 4/6] Create Zenodo JSON for project metadata --- .zenodo.json | 57 ++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 57 insertions(+) create mode 100644 .zenodo.json diff --git a/.zenodo.json b/.zenodo.json new file mode 100644 index 0000000..e4c1dc8 --- /dev/null +++ b/.zenodo.json @@ -0,0 +1,57 @@ +{ + "creators": [ + { + "name": "Campolongo, Elizabeth", + "orcid": "0000-0003-0846-2413", + "affiliation": "The Ohio State University" + }, + { + "name": "Zhang, Net", + "orcid": "0000-0003-2664-451X", + "affiliation": "The Ohio State University" + }, + { + "name": "Zarubiieva, Iuliia", + "orcid": "0009-0007-1597-8684", + "affiliation": "University of Guelph" + }, + { + "name": "Duan, Yuehua", + "orcid": "0000-0002-8547-5907", + "affiliation": "The Ohio State University" + }, + { + "name": "Taylor, Graham", + "orcid": "0000-0001-5867-3652", + "affiliation": "University of Guelph" + } + ], + "description": "

ABC-focused guide site for collaborative work, including GitHub and Hugging Face workflows.

\n

Website: abc-center.github.io/ABC-guide/

", + "keywords": [ + "interdisciplinary science", + "metadata", + "guide", + "best practices", + "cheat-sheet", + "command line cheat-sheet", + "collaborative science", + "projects", + "collaborative workflows", + "standards" + ], + "title": "AI & Biodiversity Change Global Center Guide", + "version": "1.2.0", + "license": "CC0-1.0", + "publication_date": "2026-08-31", + "grants": [ + { + "id": "021nxhr62::2118240" + }, + { + "id": "021nxhr62::2330423" + } + ], + "references": [ + "Campolongo, E. G., Thompson, M. J., Zhang, N., Duan, Y., Bradley, J., Zarubiieva, I., Taylor, G., & Lapp, H. (2026). Collaborative Distributed Science Guide (Version 2.0.0) [Computer software]. https://doi.org/10.5281/zenodo.17210328" + ] +} From ad1508682cc62adffb37bedc8c8e35bc29033e83 Mon Sep 17 00:00:00 2001 From: Elizabeth Campolongo <38985481+egrace479@users.noreply.github.com> Date: Fri, 28 Aug 2026 18:26:48 -0400 Subject: [PATCH 5/6] Add workflow to validate Zenodo metadata --- .github/workflows/validate-zenodo.yaml | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) create mode 100644 .github/workflows/validate-zenodo.yaml diff --git a/.github/workflows/validate-zenodo.yaml b/.github/workflows/validate-zenodo.yaml new file mode 100644 index 0000000..838b1fa --- /dev/null +++ b/.github/workflows/validate-zenodo.yaml @@ -0,0 +1,23 @@ +name: Check zenodo metadata + +on: + push: + paths: + - '.zenodo.json' + - '.github/workflows/validate-zenodo.yaml' + +jobs: + check-zenodo-metadata: + + runs-on: ubuntu-latest + + steps: + - uses: actions/checkout@v6 + - uses: actions/setup-node@v6 + with: + node-version: '24' + - name: Install dependencies + run: npm install zenodraft@0.14.1 + - name: Check .zenodo.json file + run: | + npx zenodraft metadata validate .zenodo.json From 17d8071542c85a466eef9c3ccee33e7faf2a3447 Mon Sep 17 00:00:00 2001 From: Elizabeth Campolongo <38985481+egrace479@users.noreply.github.com> Date: Fri, 28 Aug 2026 18:30:55 -0400 Subject: [PATCH 6/6] Remove references from CFF, covered in Zenodo JSON --- CITATION.cff | 32 -------------------------------- 1 file changed, 32 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index f86fce6..ae6972c 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -40,35 +40,3 @@ message: "If you find these docs helpful in your research, please cite them as b repository-code: "https://github.com/ABC-Center/ABC-guide" title: "AI & Biodiversity Change Global Center Guide" version: "1.2.0" -references: - - authors: - - family-names: "Campolongo" - given-names: "Elizabeth G." - orcid: "https://orcid.org/0000-0003-0846-2413" - - family-names: "Thompson" - given-names: "Matthew J." - orcid: "https://orcid.org/0000-0003-0583-8585" - - family-names: Zhang - given-names: Net - orcid: "https://orcid.org/0000-0003-2664-451X" - - family-names: "Duan" - given-names: "Yuehua" - orcid: "https://orcid.org/0000-0002-8547-5907" - - family-names: "Bradley" - given-names: "John" - orcid: "https://orcid.org/0000-0003-3858-848X" - - family-names: Zarubiieva - given-names: Iuliia - orcid: "https://orcid.org/0009-0007-1597-8684" - - family-names: Taylor - given-names: Graham - orcid: "https://orcid.org/0000-0001-5867-3652" - - family-names: "Lapp" - given-names: "Hilmar" - orcid: "https://orcid.org/0000-0001-9107-0714" - date-released: "2026-07-10" - license: CC0-1.0 - repository-code: "https://github.com/Imageomics/Collaborative-distributed-science-guide" - title: "Collaborative Distributed Science Guide" - version: 2.0.0 - doi: "10.5281/zenodo.17210328"