From 9eacd1ce2790ff683d6367ba2cd1fa29cec0f0b6 Mon Sep 17 00:00:00 2001
From: Ishika Aahna <123102828+codedbyishika@users.noreply.github.com>
Date: Thu, 30 Jul 2026 16:48:49 -0400
Subject: [PATCH] Pin Ruff

---
 .gitignore              |  3 +++
 .pre-commit-config.yaml |  9 ++++++---
 pyproject.toml          | 14 +++++++-------
 3 files changed, 16 insertions(+), 10 deletions(-)

diff --git a/.gitignore b/.gitignore
index 26f8e80..2c5bbdc 100644
--- a/.gitignore
+++ b/.gitignore
@@ -111,6 +111,9 @@ ipython_config.py
 .pdm-python
 .pdm-build/
 
+# uv
+uv.lock
+
 # PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
 __pypackages__/
 
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index ecc4517..8b786e5 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,6 +1,9 @@
 repos:
-  - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.2
+  - repo: local
     hooks:
       - id: ruff
-
+        name: ruff
+        entry: uv run --extra dev ruff check --force-exclude
+        language: system
+        types_or: [python, pyi]
+        require_serial: true
\ No newline at end of file
diff --git a/pyproject.toml b/pyproject.toml
index ff89887..b4639e1 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -30,13 +30,6 @@ dependencies = [
     "sum-buddy",
 ]
 
-[project.optional-dependencies]
-dev = [
-    "pytest",
-    "ruff",
-    "pre-commit"
-]
-
 keywords = [
     "imageomics",
     "metadata",
@@ -52,6 +45,13 @@ keywords = [
     "sum-buddy",
 ]
 
+[project.optional-dependencies]
+dev = [
+  "pytest",
+  "ruff==0.16.0",
+  "pre-commit"
+]
+
 [project.urls]
 Homepage = "https://github.com/Imageomics/cautious-robot"
 Repository = "https://github.com/Imageomics/cautious-robot.git"