Issues

• Have the QC tool report on metadata alignment with DataCite

  bridgedb/BridgeDb#243 · Filter by author egonw opened on May 16, 2024
  1

• factor out plugins into separate repositories

  enhancement
  bridgedb/BridgeDb#229 · Filter by author egonw opened on Nov 4, 2023
  

• Tool to convert a Derby file to a SSSOM file

  enhancement
  bridgedb/BridgeDb#222 · Filter by author egonw opened on Aug 4, 2023

• QC: test mapping files for expected databases

  enhancement
  bridgedb/BridgeDb#218 · Filter by author DeniseSl22 opened on Mar 8, 2023
  3

  

• describe data models on the website

  bridgedb/BridgeDb#216 · Filter by author egonw opened on Oct 26, 2022

• create VoID headers files default when saving and finalizing a Derby database

  bridgedb/BridgeDb#210 · Filter by author egonw opened on Jul 12, 2022
  1

• Test failing org.bridgedb.rdf.identifiers.org.IdentifersOrgReaderTest #nwobridgedb

  bug
  bridgedb/BridgeDb#204 · Filter by author DeniseSl22 opened on Jul 7, 2022
  

• Update readme

  bridgedb/BridgeDb#198 · Filter by author DeniseSl22 opened on Apr 19, 2022

• Derby Properties should report which data source provides attributes

  bridgedb/BridgeDb#186 · Filter by author egonw opened on Mar 24, 2022

• Work through FLOSS Best Practices Criteria and comply to all MUST

  NWO Open Science
  bridgedb/BridgeDb#176 · Filter by author egonw opened on Feb 17, 2022

• Integrating information from AlphaFold

  bridgedb/BridgeDb#175 · Filter by author NuriaQueralt opened on Jan 11, 2022
  2

  

• consider coursier to make binaries

  bridgedb/BridgeDb#170 · Filter by author egonw opened on Sep 5, 2021

• java.lang.RuntimeException on groovysh :grab

  bridgedb/BridgeDb#169 · Filter by author kozo2 opened on Sep 2, 2021

• Providing provenance information

  bridgedb/BridgeDb#164 · Filter by author lucas-ubm opened on Jan 18, 2021

• Function to obtain available data source with the package

  enhancement
  bridgedb/BridgeDb#159 · Filter by author lucas-ubm opened on Nov 26, 2020
  1

  

• make a link to the Download page an icon on the front page

  bridgedb/BridgeDb#106 · Filter by author egonw opened on May 19, 2019
  2

  

• Database identifiers should be sorted by closest match

  bridgedb/BridgeDb#97 · Filter by author DeniseSl22 opened on May 1, 2019

• BridgeDb tool to create linksets in a Wizard mode for use by biologists

  enhancement
  bridgedb/BridgeDb#86 · Filter by author egonw opened on Jan 22, 2019
  3

• Search in PV with webservice doesn't differentiate between DataNode types

  bridgedb/BridgeDb#85 · Filter by author DeniseSl22 opened on Dec 22, 2018

• Avoid returning null. Prefer Optional

  bugenhancement
  bridgedb/BridgeDb#63 · Filter by author randykerber opened on Nov 28, 2017 · 3.2.0
  1

• Tolerate loading empty linkset files into IMS

  enhancementlibrary
  bridgedb/BridgeDb#62 · Filter by author randykerber opened on Nov 27, 2017 · 3.2.0
  19

  

• Compile fail on Travis due to ClassNotFound

  bug
  bridgedb/BridgeDb#56 · Filter by author egonw opened on Sep 9, 2017
  3

• Secondary ID mapping service in Bridge DB

  bridgedb/BridgeDb#55 · Filter by author DeniseSl22 opened on Sep 4, 2017
  3

• synergizer.jar and orthoxml-0.1b.jar are not open source

  bridgedb/BridgeDb#53 · Filter by author stain opened on Aug 30, 2017
  2

• Preferred IRIs for Xref properties

  question
  bridgedb/BridgeDb#38 · Filter by author ariutta opened on Dec 14, 2016