Issues

• kProcessor v2 is not compiling

  dib-lab/kProcessor#101 · Filter by author mr-eyes opened on May 13, 2022

• kProcessor::indexPriorityQueue() does not fill/save the namesMap.

  dib-lab/kProcessor#97 · Filter by author mr-eyes opened on Apr 20, 2022

• v2 createMQF() entered infinite loop

  dib-lab/kProcessor#96 · Filter by author mr-eyes opened on Mar 21, 2022

• Can't convert phmap with murmur kmers to mqf

  dib-lab/kProcessor#95 · Filter by author mr-eyes opened on Mar 21, 2022

• kDataFrameIterator invalidated if erase

  dib-lab/kProcessor#94 · Filter by author mr-eyes opened on Dec 8, 2021

• Easy way to retrieve the groupNames associated with kmer's color?

  questionv2
  dib-lab/kProcessor#92 · Filter by author mr-eyes opened on Oct 24, 2021

• The function getKmerRow should be obsolete

  dib-lab/kProcessor#91 · Filter by author drtamermansour opened on Oct 9, 2021

• kProcessor/kSpider/sourmash thoughts for downsampling/containment matrix

  dib-lab/kProcessor#90 · Filter by author mr-eyes opened on Oct 8, 2021
  4

• little edit to the interface

  dib-lab/kProcessor#89 · Filter by author shokrof opened on Sep 11, 2021
  

• kDifferentialExpression usecase isn't working

  dib-lab/kProcessor#88 · Filter by author mr-eyes opened on Aug 31, 2021
  1

• kProcessor interface

  to be implemented
  dib-lab/kProcessor#86 · Filter by author shokrof opened on Aug 13, 2021
  3

  

• Intermediate files in the testing

  enhancement
  dib-lab/kProcessor#83 · Filter by author shokrof opened on Jun 15, 2021

• names file parsing error

  bug
  dib-lab/kProcessor#81 · Filter by author mr-eyes opened on May 25, 2021

• CMAKE versions restriction

  to be implemented
  dib-lab/kProcessor#78 · Filter by author mr-eyes opened on Apr 24, 2021

• Support multiple fasta/names files

  enhancement
  dib-lab/kProcessor#73 · Filter by author mr-eyes opened on Sep 27, 2020

• kmer counting using buffered kDataframe

  dib-lab/kProcessor#72 · Filter by author shokrof opened on Jul 8, 2020

• kDataframe PHMAP

  dib-lab/kProcessor#71 · Filter by author shokrof opened on Jul 8, 2020 · First Draft
  4

  

• Pandas Interface for KDataframes

  Pythonto be implemented
  dib-lab/kProcessor#69 · Filter by author shokrof opened on Mar 30, 2020 · First Draft
  1

  

• kDataFrameMQF false returned size()

  dib-lab/kProcessor#67 · Filter by author mr-eyes opened on Mar 30, 2020

• Implement RHS for kdataframe

  dib-lab/kProcessor#66 · Filter by author shokrof opened on Mar 27, 2020

• Transform between kDataframes

  C++to be implemented
  dib-lab/kProcessor#65 · Filter by author shokrof opened on Mar 24, 2020 · First Draft
  

• Circos Plotting

  Pythonto be implemented
  dib-lab/kProcessor#63 · Filter by author shokrof opened on Mar 24, 2020
  1

• Dendogram plotting

  Pythonto be implemented
  dib-lab/kProcessor#62 · Filter by author shokrof opened on Mar 24, 2020

• Venn Diagram Plotting

  Pythonto be implemented
  dib-lab/kProcessor#61 · Filter by author shokrof opened on Mar 24, 2020

• PCA and plot using Matplotlib

  Pythonto be implemented
  dib-lab/kProcessor#60 · Filter by author shokrof opened on Mar 24, 2020