Issues

• Does ultraplex handle barcodes that might be reversecomplement of each other

  ulelab/ultraplex#56 · Filter by author Rohit-Satyam opened on Feb 15, 2026
  2

• Problem with running Ultraplex

  ulelab/ultraplex#53 · Filter by author lichen-fungus opened on Mar 21, 2024
  3

• Could the read name modification be improved?

  ulelab/ultraplex#52 · Filter by author TomSmithCGAT opened on Feb 26, 2024
  5

• Comaptibility issue with Python3.10

  ulelab/ultraplex#45 · Filter by author simonpfisterer opened on Jul 19, 2023
  1

• demultiplexing of dual-indexed, single-end fastq.gz files with index in header

  ulelab/ultraplex#44 · Filter by author rikrdo89 opened on Jul 12, 2023
  1

• Test Ultraplex on PacBio sequencing data

  ulelab/ultraplex#43 · Filter by author gooodle opened on May 29, 2023
  1

• ValueError: Cannot have only N wildcards in the sequence

  ulelab/ultraplex#42 · Filter by author realzhang opened on May 19, 2023

• Demultiplexing indexed plasmid barcode libraries

  ulelab/ultraplex#41 · Filter by author rahmas36 opened on May 1, 2023
  12

• Demultiplexing does not recognize 3' barcode

  ulelab/ultraplex#40 · Filter by author tiagobrc opened on Oct 21, 2022
  5

• ultraplex does not remove barcode from the other read (when insert is short); ultraplex destroy read ID

  ulelab/ultraplex#39 · Filter by author algaebrown opened on Sep 28, 2022
  4

• Remove barcodes from 3' end only

  ulelab/ultraplex#38 · Filter by author Vishvak2000 opened on Sep 8, 2022
  1

• Memory explosion

  ulelab/ultraplex#37 · Filter by author bschilder opened on May 31, 2022
  4

• Using different adapters across samples

  ulelab/ultraplex#36 · Filter by author bschilder opened on May 25, 2022
  9

• please tag release to be in sync with pipy

  ulelab/ultraplex#35 · Filter by author EricDeveaud opened on Apr 7, 2022
  1

• Feature request: Enable option to not adapter trim or quality trim

  ulelab/ultraplex#34 · Filter by author jpuritz opened on Mar 28, 2022
  3

• Make using p7 sequences easier

  ulelab/ultraplex#32 · Filter by author Delayed-Gitification opened on Jan 19, 2022

• Support for variable length barcodes would be useful

  ulelab/ultraplex#31 · Filter by author JHarrisonEcoEvo opened on Jan 7, 2022
  6

• Error: TypeError: object of type 'NoneType' has no len()

  ulelab/ultraplex#30 · Filter by author grendon opened on Nov 19, 2021
  1

• Remove SLURM outputs from sbatch mode

  ulelab/ultraplex#16 · Filter by author Delayed-Gitification opened on Oct 23, 2020

• Check that barcodes are not duplicated

  ulelab/ultraplex#14 · Filter by author Delayed-Gitification opened on Oct 15, 2020

• Enable demux using only 3' barcodes

  ulelab/ultraplex#5 · Filter by author Delayed-Gitification opened on Sep 12, 2020