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1. Analysis-Driver Analysis-Driver Public

   Pipelines for Illumina HiSeqX demultiplexing, sequence QC and variant calling.

   Python 8

2. Reporting-App Reporting-App Public

   A Flask web app for presenting bcl2fastq and variant calling performance reports from Analysis-Driver

   Python 4 1

3. EGCG-Project-Management EGCG-Project-Management Public

   Tools for managing the data generated by EdinburghGenomics/Analysis-Driver, including review, delivery and deletion.

   Python 1

4. clarity_scripts clarity_scripts Public

   API and EPP scripts

   Python 1

5. EGCG-Core EGCG-Core Public

   Shared functionality across EGCG projects

   Python 2

6. pyclarity-lims pyclarity-lims Public

   Forked from SciLifeLab/genologics

   Python interface to the GenoLogics LIMS server via its REST API.

   Python 11 5