Skip to content
@GaitiLab

Gaiti Lab

multi-omics research group at the University Health Network (UHN)

Popular repositories Loading

  1. scrnaseq-cellcomm-pipeline scrnaseq-cellcomm-pipeline Public

    Pipeline for inferring cell-cell interactions from scRNAseq data using multiple publicly available tools.

    Nextflow 9 2

  2. nf-processes nf-processes Public

    modules for processing and analyzing single cell data using Nextflow

    Nextflow 3 1

  3. GBMutils GBMutils Public

    Helper functions for GBM project

    R 2

  4. gbm_manuscript gbm_manuscript Public

    Code for paper "Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration"

    R 2 1

  5. scRRBS_pipeline scRRBS_pipeline Public

    Python 1

  6. GaitiLabUtils GaitiLabUtils Public

    Functions for R-projects

    R 1 1

Repositories

Showing 10 of 17 repositories
  • guides Public Forked from tidyverse/style

    The Gaiti Lab style guide for R code based on tidverse styleguide

    GaitiLab/guides's past year of commit activity
    SCSS 0 122 0 0 Updated Nov 3, 2026
  • containers Public
    GaitiLab/containers's past year of commit activity
    Dockerfile 0 0 0 0 Updated Oct 28, 2026
  • RNA_MUTECT_1.0-1 Public Forked from broadinstitute/RNA_MUTECT_1.0-1
    GaitiLab/RNA_MUTECT_1.0-1's past year of commit activity
    Shell 0 BSD-3-Clause 11 0 0 Updated Oct 14, 2026
  • gbm_manuscript Public

    Code for paper "Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration"

    GaitiLab/gbm_manuscript's past year of commit activity
    R 2 MIT 1 0 0 Updated Oct 8, 2026
  • msigdbr Public Forked from igordot/msigdbr

    MSigDB gene sets for multiple organisms in a tidy data format

    GaitiLab/msigdbr's past year of commit activity
    R 0 14 0 0 Updated Aug 20, 2026
  • scrnaseq-cellcomm-pipeline Public

    Pipeline for inferring cell-cell interactions from scRNAseq data using multiple publicly available tools.

    GaitiLab/scrnaseq-cellcomm-pipeline's past year of commit activity
    Nextflow 9 MIT 2 0 0 Updated Jun 19, 2026
  • scrnaseq-cellcomm Public
    GaitiLab/scrnaseq-cellcomm's past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Nov 22, 2025
  • GaitiLabUtils Public

    Functions for R-projects

    GaitiLab/GaitiLabUtils's past year of commit activity
    R 1 GPL-3.0 1 0 0 Updated Aug 12, 2025
  • scRNAseq_pipeline Public
    GaitiLab/scRNAseq_pipeline's past year of commit activity
    R 0 0 0 0 Updated Jan 15, 2025
  • GBMutils Public

    Helper functions for GBM project

    GaitiLab/GBMutils's past year of commit activity
    R 2 GPL-3.0 0 0 0 Updated Nov 28, 2024
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…