IMB-Computational-Genomics-Lab
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SingleCells2018Workshop
SingleCells2018Workshop PublicMaterials for the Single Cells 2018 informatics workshop
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BGIvsIllumina_scRNASeq
BGIvsIllumina_scRNASeq PublicCode repository for the publication "Comparative performance of the BGI and Illumina sequencingtechnology for single-cell RNA-sequencing" by Senabouth et al.
Repositories
- BGIvsIllumina_scRNASeq Public
Code repository for the publication "Comparative performance of the BGI and Illumina sequencingtechnology for single-cell RNA-sequencing" by Senabouth et al.
- scGPS Public
A framework for clustering (CORE) and estimation of relationship between pairs of clusters (scGPS) from single cell data
- hiPSC_paper_2018 Public
- RetinalCellAtlas_EMBOJ_2019 Public
Additional files to accompany adult human retina cell atlas - Lukowski & Lo et al 2019 EMBO J
- ascend Public
R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)
- ChromiumSingleCellPipeline Public
Scripts to generate custom references and PBS scripts for the 10x Genomics Chromium pipeline.
- scIVA Public
R package and web-tool for interactive visualisation and analysis of single cell RNA-Seq data
- RetinaGanglionCells Public
Public repository for code associated with the processing of single-cell retina ganglion cells
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