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Clarify gVCF processing steps for SPARK and UKBB Build and Push Multiple GHCR Images #50: Commit 6030cc9 pushed by FloBeni
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Replace curl with wget for downloading cache Build and Push Multiple GHCR Images #49: Commit 70c8ba9 pushed by FloBeni
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Add ca-certificates to Dockerfile dependencies Build and Push Multiple GHCR Images #48: Commit 679ff6c pushed by FloBeni
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Add samtools to Dockerfile dependencies Build and Push Multiple GHCR Images #47: Commit 5ea1e9b pushed by FloBeni
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Remove bgzip from Dockerfile dependencies Build and Push Multiple GHCR Images #46: Commit 365ffe8 pushed by FloBeni
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Update genome version from GRCh37 to GRCh38 Build and Push Multiple GHCR Images #45: Commit f2197d3 pushed by FloBeni
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Merge pull request #4 from JacquemontLab/grch37_update Build and Push Multiple GHCR Images #44: Commit cc9a87e pushed by FloBeni
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update the producetsvpersample task to correctly detect file without … Build and Push Multiple GHCR Images #43: Commit a34d204 pushed by FloBeni
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add GRCh37 first draft, it's a bit manual at the moment Build and Push Multiple GHCR Images #42: Commit f98c7f7 pushed by FloBeni
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Clarify report output path variable name Build and Push Multiple GHCR Images #41: Commit 5617b2d pushed by FloBeni
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Update README with database optimization details Build and Push Multiple GHCR Images #40: Commit c9eba66 pushed by FloBeni
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Feature: Implement VEP ID logic (consolidated version) Build and Push Multiple GHCR Images #39: Commit 6fcde0f pushed by FloBeni
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Revert "use ID in VEP and not selfmade ID" Build and Push Multiple GHCR Images #38: Commit cc6c5df pushed by FloBeni
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use ID in VEP and not selfmade ID, version 7 Build and Push Multiple GHCR Images #37: Commit da5ad05 pushed by FloBeni
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use ID in VEP and not selfmade ID, version 6 Build and Push Multiple GHCR Images #36: Commit 42b8502 pushed by FloBeni
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use ID in VEP and not selfmade ID, version 4 Build and Push Multiple GHCR Images #35: Commit f3c1784 pushed by FloBeni
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use ID in VEP and not selfmade ID, version 3 Build and Push Multiple GHCR Images #34: Commit 5a7d33c pushed by FloBeni
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use ID in VEP and not selfmade ID, version 2 Build and Push Multiple GHCR Images #33: Commit 74c5db3 pushed by FloBeni
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use ID in VEP and not selfmade ID Build and Push Multiple GHCR Images #32: Commit 636c7d8 pushed by FloBeni
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add nf_test Build and Push Multiple GHCR Images #31: Commit 74963be pushed by FloBeni
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needs indexing file before removing chr1-22 Build and Push Multiple GHCR Images #30: Commit 7281433 pushed by FloBeni
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update readme, and remove chr not in 1-22, X and Y Build and Push Multiple GHCR Images #29: Commit 407a7e8 pushed by FloBeni
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Clarify container platform usage in README Build and Push Multiple GHCR Images #28: Commit 973d873 pushed by FloBeni
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Update README with required FORMAT fields for gVCF Build and Push Multiple GHCR Images #27: Commit 673a279 pushed by FloBeni
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update test file, and sh script extraction Build and Push Multiple GHCR Images #26: Commit 93431b4 pushed by FloBeni
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