MicrobialGenomics-IrsicaixaOrg
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ViCroSeq
ViCroSeq PublicA tool for the removal of Viral Cross-Contamination in Sequencing - ViCroSeq
Shell
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TTrichiura_Tubulin
TTrichiura_Tubulin PublicPipeline to analyze beta-tubulin gene of Trichuris Trichiura, and call nucleotide and amino acid mutations on coding and non-coding regions, separately
Nextflow
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modules
modules PublicForked from nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow
Repositories
- dar Public
dar: runs multiple differential abundance analysis methods and through a consensus strategy returns a set of differentially abundant features.
- fcatala_advanz4 Public
- ivihome Public
- resistence_gem Public
- gemmicroflow Public
MicroFlow Analyzer is a Nextflow-based pipeline for comprehensive microbiome FASTQ analysis. It integrates taxonomic profiling, functional annotation, Integrated Gene Catalog (IGC) analysis, and Metagenome-Assembled Genomes (MAGs) reconstruction.
- microfunk Public
- Lamivudine_mice_RNAseq Public
- modules Public Forked from nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
- test-datasets Public Forked from nf-core/test-datasets
Test data to be used for automated testing with the nf-core pipelines
- 2022_MedCars Public
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