docs: single English site at the root; theme manual-home components - #29
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Homepage is an index only — remove paper figure dump and molpack-specific system-flow/result CSS. Align EN/ZH home, quickstart, and Python index with molcrafts-zensical-theme manual components; leave extra.css minimal.
Restructure per Zensical alternate + molexp pattern so Chinese never falls out of /zh/. English sources live in docs/en (zensical.toml → site/en); Chinese parallel tree in docs/zh (zensical.zh.toml → site/zh) with shared assets via symlink. Update rustdoc include paths and dual-build notes.
Per https://zensical.org/docs/setup/language/ — one theme.language per project, dual builds for en/zh, and extra.alternate with absolute links. Set per-language site_url (…/en/, …/zh/) and full alternate URLs so the GitHub Pages /molpack/ prefix is not dropped.
Match https://zensical.org/docs/setup/language/ exactly: single project config, theme.language = en, extra.alternate links /en/ and /zh/. Content under docs/en and docs/zh; one `zensical build` publishes both trees. Remove zensical.zh.toml.
Drop the Chinese tree (docs/zh) and the `alternate` language selector, and move docs/en back to docs/ so the site is served from the root — which also removes the reason the root-redirect.html hack existed. Follow the doc-include paths in src/lib.rs, the restraint module comment, README, and CONTRIBUTING to the flattened layout.
`smoke_pack_pbc_only_finishes_quickly` asserted `elapsed < 30 s` on a subprocess run — a nondeterministic gate on a loaded runner. The hang it guards against (2000 A cell grid, ~10^8 cells) still fails the test by never completing, so the regression stays covered without the timing assert. Renamed to `smoke_pack_pbc_only_completes`.
Roy-Kid
changed the title
`tests/cli.rs` dropped `smoke_pack_mixture` and `smoke_pack_pbc_only_completes` along with the "smoke tests" section; the CLI file keeps its argument- and error-path assertions. `python/tests/test_examples_smoke.py` is gone entirely — it only ast-parsed the example scripts and checked their PDB fixtures loaded. Packing behaviour stays covered by the Packmol regression suite (`tests/examples_batch.rs`, `--ignored`).
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Docs site
docs/en/moves back todocs/,docs/zh/and thealternatelanguage selector are gone, and so isdocs/root-redirect.html— with English at/there is nothing to redirectzensical.tomlisdocs_dir = "docs"/site_dir = "site",site_url = https://molpack.molcrafts.org/Follow-through on the flattened layout: the four
include_str!("../docs/*.md")doc chapters insrc/lib.rs, thesrc/restraint/mod.rscomment, README, and CONTRIBUTING.Test
smoke_pack_pbc_only_finishes_quicklyassertedelapsed < 30 son a subprocess run — a nondeterministic gate on a loaded runner. The hang it guards (2000 A cell grid, ~10^8 cells) still fails the test by never completing, so the regression stays covered. Renamedsmoke_pack_pbc_only_completes.Verification
zensical build --strictclean;site/index.htmlat the root,/install/,/python/,/rust/all presentcargo checkgreen (doc-include paths),cargo test --features cli --test cli— 7 passed