Oshlack

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1. splatter splatter Public

   Simple simulation of single-cell RNA sequencing data

   R 234 60

2. JAFFA JAFFA Public

   JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions

   C++ 116 23

3. Corset Corset Public

   Software for clustering de novo assembled transcripts and counting overlapping reads

   C++ 80 20

4. Lace Lace Public

   Building SuperTranscripts: A linear representation of transcriptome data

   Python 67 21

5. STRetch STRetch Public

   Method for detecting STR expansions from short-read sequencing data

   Python 63 16

6. Clinker Clinker Public

   Gene Fusion Visualiser

   Python 52 12