VMD-scripts

#adjust all the folders please. namely in vis_GaAs.vmd;makemovie*

Name		Name	Last commit message	Last commit date
README.md		README.md
black_totransp.py		black_totransp.py
clip_supercell.vmd		clip_supercell.vmd
cubes2png.sh		cubes2png.sh
draw_arc.py		draw_arc.py
draw_arrow.tcl		draw_arrow.tcl
draw_dotted_bond.tcl		draw_dotted_bond.tcl
draw_polygons.tcl		draw_polygons.tcl
makemovie_orientations.tcl		makemovie_orientations.tcl
makemovie_orientations_notraj.tcl		makemovie_orientations_notraj.tcl
mark_surfacebonds.py		mark_surfacebonds.py
new_vcr.vmd		new_vcr.vmd
render-tachyon-update-all.sh		render-tachyon-update-all.sh
render-tachyon.sh		render-tachyon.sh
render-tachyonGPU.sh		render-tachyonGPU.sh
render.sh		render.sh
traj2movie.sh		traj2movie.sh
unitcell_offsets.py		unitcell_offsets.py
vis_GaAs.vmd		vis_GaAs.vmd
vmd_pick_angles.tcl		vmd_pick_angles.tcl
vmd_pick_atoms.tcl		vmd_pick_atoms.tcl
vmd_pick_bonds.tcl		vmd_pick_bonds.tcl
write_vmd_sep.sh		write_vmd_sep.sh

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