Prankweb online is a web frontend for P2Rank a protein-ligand binding site prediction tool based on machine learning.
You can run:
- P2Rank on your computer using Docker.
- Prankweb on you computer using Docker. This includes HTTP server.
- P2Rank without Docker with limited functionality. Suitable for developers.
More information about P2Rank and prankweb can be found in the wiki.
- Lukáš Polák, Petr Škoda, Kamila Riedlová, Radoslav Krivák, Marian Novotný and David Hoksza. PrankWeb 4: a modular web server for protein–ligand binding site prediction and downstream analysis. Nucleic Acids Research. May 2025
- Dávid Jakubec, Petr Škoda, Radoslav Krivák, Marian Novotný and David Hoksza. PrankWeb 3: accelerated ligand-binding site predictions for experimental and modelled protein structures. Nucleic Acids Research. May 2022
- Lukáš Jendele and Radoslav Krivák and Petr Škoda and Marian Novotný and David Hoksza. PrankWeb: a web server for ligand binding site prediction and visualization. Nucleic Acids Research. May 2019