Issues

• unable to install databases

  dib-lab/dammit#243 · Filter by author peter0k opened on May 19, 2023
  3

• dammit install through conda --- stuck at Solving environment

  dib-lab/dammit#242 · Filter by author Liyong-Zhang opened on Jan 30, 2023
  1

• problem in downloading database when running dammit databases --install

  dib-lab/dammit#241 · Filter by author tboonf opened on Nov 27, 2022

• TaskLoader issue

  dib-lab/dammit#239 · Filter by author jarcasariego opened on Sep 28, 2022
  4

• doit.cmd_base.py:TaskLoader

  dib-lab/dammit#238 · Filter by author Snettisham opened on Jun 15, 2022

• databases installation errors

  dib-lab/dammit#237 · Filter by author ncnlll opened on May 11, 2022

• Not recognizing BUSCO?

  dib-lab/dammit#236 · Filter by author incoreygible opened on Feb 2, 2022

• Download issue

  dib-lab/dammit#233 · Filter by author mthang opened on Oct 12, 2021

• No symbol dbm_open found in library libdb-6.2.so

  dib-lab/dammit#230 · Filter by author pmoulos opened on May 13, 2021
  1

• curl: (28) Failed to connect to cegg.unige.ch port 21: Connection timed out

  dib-lab/dammit#229 · Filter by author hoelzer opened on May 9, 2021
  14

• TypeError: an integer is required (got type bytes)

  dib-lab/dammit#227 · Filter by author jtoy7 opened on Apr 1, 2021
  2

• Solving environment: failed with repodata

  dib-lab/dammit#225 · Filter by author PedroDaPos opened on Mar 5, 2021
  1

• TODO: Move target generation inside Snakefile

  dib-lab/dammit#218 · Filter by author camillescott opened on Jan 29, 2021 · 2.0

• TypeError: lastal_task() got an unexpected keyword argument 'pbs'

  dib-lab/dammit#203 · Filter by author AntonioBaeza opened on Dec 15, 2020
  6

• Can I install newer versions of BUSCO than v2?

  dib-lab/dammit#202 · Filter by author sformel opened on Nov 30, 2020

• Please delete this issue

  dib-lab/dammit#195 · Filter by author vragh opened on Aug 17, 2020

• TaskError - taskid:hmmscan:longest_orfs.pep.x.Pfam-A.hmm

  dib-lab/dammit#194 · Filter by author sarah872 opened on Aug 14, 2020

• Get metalink working for database download

  dib-lab/dammit#192 · Filter by author bluegenes opened on Aug 1, 2020
  

• seqid inconsistency with --no-rename between shmlast and other programs

  bug
  dib-lab/dammit#190 · Filter by author camillescott opened on Jul 10, 2020 · 2.0

• damit annotate Exited with exit code 140

  dib-lab/dammit#187 · Filter by author CeciliaDeng opened on Jun 7, 2020
  2

• Error: sqlite3 unable to open database file

  dib-lab/dammit#183 · Filter by author blasks opened on May 15, 2020
  4

• try using a snakemake profile to set cluster run params

  dib-lab/dammit#182 · Filter by author bluegenes opened on May 11, 2020

• Accidentally ran without pep file at first. Which files to delete? And nohup issue

  dib-lab/dammit#163 · Filter by author christa88 opened on Mar 29, 2020

• BUSCO v2 database download fails, but gets marked as done

  dib-lab/dammit#161 · Filter by author eburgueno opened on Mar 4, 2020

• lastdb:uniref90

  dib-lab/dammit#154 · Filter by author AEG4 opened on Sep 30, 2019
  1