gatech-genemark

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1. ProtHint ProtHint Public

   Protein hint generation pipeline for gene finding in eukaryotic genomes

   Python 62 14

2. GeneMark-ETP GeneMark-ETP Public

   GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology

   AMPL 32 8

3. MetaGeneMark-2 MetaGeneMark-2 Public

   MetaGeneMark-2: Improved Gene Prediction in Metagenomes

   AMPL 23 5

4. GeneMark-EP-plus GeneMark-EP-plus Public

   GeneMark-EP and -EP+: automatic eukaryotic gene prediction supported by spliced aligned proteins

   13 1

5. Mgcod Mgcod Public

   Tool for recognizing genetic codes (incl. multiple genetic codes in phage genomes) and genetic-code-informed annotation of coding regions in prokaryotic sequences

   Python 10

6. EukSpecies-BRAKER2 EukSpecies-BRAKER2 Public

   Repository with data of eukaryotic species used in BRAKER2 experiments

   Perl 5 2