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Fix python deprecations (nemesis and pkg_resources) to allow use with Python 3.13 and later #84

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Merged
baagaard-usgs merged 4 commits into from
Oct 23, 2026
Merged

Fix python deprecations (nemesis and pkg_resources) to allow use with Python 3.13 and later #84

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2253f8b
nemesis: Regenerate _mpi.c using Cython 3.3.0 for compatibility with …
baagaard-usgs Oct 22, 2026
18dcb79
nemesis: Set sys.argv using PyConfig instead of PySys_SetArgv() which…
baagaard-usgs Oct 22, 2026
56228d9
pyre: Use importlib and packaging in place of deprecated pkg_resources.
baagaard-usgs Oct 22, 2026
6154c7a
metadata: Update CHANGES and set version to 1.3.1.
baagaard-usgs Oct 22, 2026
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6 changes: 6 additions & 0 deletions CHANGES.md
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@@ -1,5 +1,11 @@
See <https://github.com/geodynamics/pythia/commits/master> for the complete log of changes made to Pythia/Pyre.

## Version 1.3.1 (2026-10-23)

* Fixed incompatibilities with Python 3.13 and later in nemesis.
* Replaced deprecated `pkg_resources` usage with `importlib.metadata`, `importlib.resources`, and `packaging` for compatibility with setuptools 81+ (where `pkg_resources` is removed).
* Updated Python requirement to version 3.10 or later.

## Version 1.3.0 (2026-08-17)

* Added pygments lexer `pyrejournal' for syntax highlighting of journal output.
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2 changes: 1 addition & 1 deletion COPYING
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@@ -1,4 +1,4 @@
Copyright (c) 1998-2005, Michael A.G. Aivazis
Copyright (c) 1998-2026, Michael A.G. Aivazis
All rights reserved.

Redistribution and use in source and binary forms, with or without
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -24,8 +24,8 @@ simulations. This fork focuses (and maintains) functionality for:

## Release Notes

See [CHANGES](CHANGES) for a list of changes for recent releases.
See [CHANGES](CHANGES.md) for a list of changes for recent releases.

## Maintainer

* Brad Aagaard, Geologic Hazards Science Center, U.S. Geological Survey, USA
* Brad Aagaard, U.S. Geological Survey, Geologic Hazards Science Center, USA
4 changes: 2 additions & 2 deletions configure.ac
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Expand Up @@ -3,7 +3,7 @@ dnl Process this file with autoconf to produce a configure script.
dnl

AC_PREREQ(2.59)
AC_INIT([pythia], [1.3.0], [baagaard@usgs.gov])
AC_INIT([pythia], [1.3.1], [baagaard@usgs.gov])
AC_CONFIG_HEADER([portinfo])
AC_CONFIG_AUX_DIR([./aux-config])
AC_CONFIG_MACRO_DIR([m4])
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AC_PROG_INSTALL

AM_PATH_PYTHON([3.8])
AM_PATH_PYTHON([3.10])
AC_ARG_VAR(PYTHON, [Python interpreter])
AC_ARG_VAR(PYTHONPATH, [Python module search path])
CIT_PYTHON_SYSCONFIG
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