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bugfix in wt counting, general improvements - #16

Merged

harmsm merged 7 commits into

harmslab:mainfrom

Sep 10, 2026

Merged

bugfix in wt counting, general improvements#16
harmsm merged 7 commits into
harmslab:mainfrom
harmsm:main

Commits on Jul 24, 2026
- upgraded run_compare code to be general
  harmsm
  committed
  39efa30
Commits on Jul 29, 2026
- updated compare_runs to be more general
  harmsm
  committed
  4289f76
Commits on Aug 3, 2026
- fixed wt counting bug in counts_to_lncfu
  harmsm
  committed
  92c8369
- fixed bug in num_workers cli for process fastq
  harmsm
  committed
  f20e124
Commits on Aug 5, 2026
- Speed up tfs-process-fastq: compiled BK-tree search + per-worker ftc
  
  harmsm
  and
  claude
  committed
  656c170
- update report for last ocmmit
  harmsm
  committed
  c24de5d
Commits on Aug 27, 2026
- added number of parameters estimate to configure
  harmsm
  committed
  d26f030