devops_tests

pytest test routines asserting for GitHub issue-linked TO-DO labelling in the code, README link consistency and some Jupyter notebook sanity checks

Pre-commit hooks:

check_notebook_open_atmos_structure

Check Jupyter notebooks structure default for open-atmos projects. Required:

• three badges in the first cell:

• markdown type of the second cell
• Colab-header in the third cell

import os, sys
os.environ['NUMBA_THREADING_LAYER'] = 'workqueue'  # PySDM & PyMPDATA don't work with TBB; OpenMP has extra dependencies on macOS
if 'google.colab' in sys.modules:
    !pip --quiet install open-atmos-jupyter-utils
    from open_atmos_jupyter_utils import pip_install_on_colab
    pip_install_on_colab('devops_tests-examples', 'devops_tests')

0xx -> Execution Problems

These errors relate to notebook execution state and structural integrity.

• NB000 – Missing execution count
• NB001 – Empty execution
• NB002 – Cell contains execution error
• NB003 – Insufficient number of cells (minimum required not met)
• NB004 – Invalid or missing required content in first cell

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1xx -> Badge Problems

These errors relate to required badges in the first notebook cell.

• NB100 - Incorrect GitHub preview badge
• NB101 – Incorrect MyBinder badge
• NB102 – Incorrect Colab badge

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2xx -> Markdown Problems

These errors relate to required markdown structure in the second notebook cell.

• NB200 – Required markdown cell missing
• NB201 – Invalid markdown structure
• NB202 – Required markdown section missing

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3xx -> Colab Header Problems

These errors relate to the required Colab setup header.

• NB300 – Header missing
• NB301 – Header version mismatch
• NB302 – Invalid header content
• NB303 – Header in incorrect position

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4xx -> open-atmos-jupyter-utils Problems

These errors relate to the usage of show_anim() and show_plot() functions from open-atmos-jupyter-utils package required when matplotlib is used.

• NB400 - show_plot not used
• NB401 - show_anim not used