Issues

• Conda recipe outdated

  patrickwest/EukRep#26 · Filter by author franlat opened on Nov 9, 2025

• Missing model / wron CLI help

  patrickwest/EukRep#25 · Filter by author bernt-matthias opened on Jul 30, 2025

• ModuleNotFoundError: No module named 'sklearn.svm.classes'

  patrickwest/EukRep#23 · Filter by author Sung-hub opened on Mar 26, 2024
  1

• ImportError: No module named EukRep.EukRep

  patrickwest/EukRep#22 · Filter by author fredchaux opened on Nov 24, 2023

• Installation error Bioconda

  patrickwest/EukRep#21 · Filter by author ilarioferrocino opened on Mar 3, 2023

• how to obtain the eukaryon bins ? what is the code?

  patrickwest/EukRep#20 · Filter by author weiguanyue opened on Feb 13, 2023

• Installation Error on MacOSX

  patrickwest/EukRep#19 · Filter by author ReneKat opened on Jan 7, 2022
  2

• Unexpected result with EukRep test

  patrickwest/EukRep#18 · Filter by author mgabriell1 opened on Oct 29, 2021
  2

• What methods/parameters would you recommend for running this on potentially eukaryotic MAGs?

  patrickwest/EukRep#16 · Filter by author jolespin opened on Jul 30, 2021

• can the input be the reads of metagenomes

  question
  patrickwest/EukRep#13 · Filter by author FengqingWang0712 opened on Jul 27, 2020
  1

• Taxon identifiers for training data?

  question
  patrickwest/EukRep#9 · Filter by author jolespin opened on Nov 26, 2019
  4

• minimum contig length for confident classification result?

  question
  patrickwest/EukRep#6 · Filter by author jzrapp opened on Oct 29, 2019
  3

• [Question] How does it handle organisms that have undergone secondary symbiosis? (e.g. diatoms)

  question
  patrickwest/EukRep#5 · Filter by author jolespin opened on Aug 15, 2019
  1

• Numpy errors

  patrickwest/EukRep#4 · Filter by author susheelbhanu opened on Jul 28, 2019

• simple run eukrep problem

  patrickwest/EukRep#3 · Filter by author ghost opened on May 30, 2018