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Fix Golden Gate ds-fragment overhang boundaries and SapI 3-nt overhang length
#370Lovlace777 opened Nov 12, 2026
Mask API key in A1's default configuration output
#367HuanLi0311 opened Oct 11, 2026
1
Fix retries in function_to_api_schema
#365HuanLi0311 opened Oct 11, 2026
Fix model fallback in get_llm
#363HuanLi0311 opened Oct 11, 2026
fix: include bundled know-how and protocol data in distributions
#361jeffyliu24 opened Oct 10, 2026
docs: fix know-how example link in README
#360jeffyliu24 opened Oct 10, 2026
Keep MCP sessions open and return tool results as text (fixes #135)
#357danielLuo2 opened Oct 7, 2026
Add Firecrawl search and scrape tools to literature (keyless, optional API key)
#356JuampiHernandez opened Sep 22, 20265 of 6 tasks
2
Add Cortical Organoids Atlas metadata tool
#354kreid415 opened Sep 21, 2026
Add TransOmicsData chen-organoid metadata tool
#353kreid415 opened Sep 21, 2026
Add HCA organoid project metadata tool
#352kreid415 opened Sep 21, 2026
Add GitHub Actions workflow for Python application
#351omrowen opened Sep 14, 2026
4
Memory system
#349yg-326 opened Sep 10, 2026
Add AlphaFold bulk metadata database tool
#348kreid415 opened Sep 10, 2026
fix(know-how): preserve non-metadata markdown separators
#347krudo-taco opened Sep 10, 2026
fix(retriever): ignore invalid model-selected indices
#346krudo-taco opened Sep 10, 2026
Add HuBMAP dataset database tool
#344kreid415 opened Sep 8, 2026
Add Human Cell Atlas project database tool
#343kreid415 opened Sep 8, 2026
Add CELLxGENE collection database tool
#342kreid415 opened Sep 8, 2026
Add PubTator literature tool
#341kreid415 opened Sep 8, 2026
Add bioRxiv/medRxiv literature tool
#340kreid415 opened Sep 8, 2026
Add Semantic Scholar literature tool
#339kreid415 opened Sep 8, 2026
Unpaywall
#338kreid415 opened Sep 8, 2026
Crossref
#337kreid415 opened Sep 5, 2026
OpenAlex
#336kreid415 opened Sep 4, 2026

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