Issues

• Allow 'path' arguments instead of strings

  sys-bio/tellurium#606 · Filter by author luciansmith opened on Jan 20, 2026

• SED-ML routines incorrect

  sys-bio/tellurium#602 · Filter by author luciansmith opened on Jul 4, 2025

• Handle task output that's also part of a repeated task.

  sys-bio/tellurium#603 · Filter by author luciansmith opened on Jun 28, 2025

• SED-ML interpretation changes with changeAttribute re-ordering

  sys-bio/tellurium#604 · Filter by author luciansmith opened on Jun 27, 2025

• Antimony example in docs fails with tellurium 2.2.10

  sys-bio/tellurium#601 · Filter by author elbert5770 opened on May 17, 2025

• Save all reports, not just latest in SED-ML

  sys-bio/tellurium#600 · Filter by author luciansmith opened on May 5, 2025
  2

• SED-ML: Allow LSODA parameters to be set on CVODE runs.

  sys-bio/tellurium#595 · Filter by author luciansmith opened on Dec 5, 2024

• error while installing tellurium using pip

  sys-bio/tellurium#594 · Filter by author jurquiza opened on Oct 10, 2024
  9

• example for ParameterScan from docs broken

  sys-bio/tellurium#592 · Filter by author SchwarzMarek opened on Aug 9, 2024

• Parallelization issues with pocoMC

  sys-bio/tellurium#591 · Filter by author lisaotten opened on Aug 5, 2024
  11

• Allow log plots in SED-ML

  sys-bio/tellurium#586 · Filter by author luciansmith opened on Mar 8, 2024
  1

• Search odd for tellurium readthedocs

  sys-bio/tellurium#582 · Filter by author luciansmith opened on Jan 11, 2024
  1

• Fix SED-ML interpretation of multiple repeated subtasks

  sys-bio/tellurium#576 · Filter by author luciansmith opened on Dec 7, 2023

• What's the best way of modelling changing volumes?

  sys-bio/tellurium#572 · Filter by author julibeg opened on Oct 4, 2023
  5

• SED-ML: Repeated task output not exported correctly

  sys-bio/tellurium#566 · Filter by author luciansmith opened on Jan 26, 2023

• multiprocessing parallelization and deep copy gives unexpected results

  sys-bio/tellurium#563 · Filter by author augeorge opened on Oct 6, 2022
  2

• Add documentation on piecewise to Antimony docs

  sys-bio/tellurium#548 · Filter by author hsauro opened on Oct 26, 2021
  

• Add seed to constructor of Gillespie in Python

  sys-bio/tellurium#543 · Filter by author CiaranWelsh opened on Sep 2, 2021
  1

• Raise errors on unrecognized KiSAO algorithm parameters

  sys-bio/tellurium#539 · Filter by author jonrkarr opened on Aug 23, 2021

• Automate releasing to BioSimulators

  sys-bio/tellurium#530 · Filter by author jonrkarr opened on Jun 8, 2021
  2

• Use KiSAO Python package to recognize KiSAO terms for similar algorithms

  sys-bio/tellurium#529 · Filter by author jonrkarr opened on Jun 5, 2021

• Delete mapping from KiSAO to variable step size for SED-ML UniformTimeCourse

  sys-bio/tellurium#528 · Filter by author jonrkarr opened on Jun 5, 2021
  3

• Properly handle algorithm parameters upon substituting algorithms to alternatives

  sys-bio/tellurium#526 · Filter by author jonrkarr opened on May 3, 2021

• tellurium seems to have problem when there are no data generators or maybe when there are no outputs

  sys-bio/tellurium#524 · Filter by author jonrkarr opened on Apr 22, 2021

• tellurium can't handle calculations involving values of SED ranges

  sys-bio/tellurium#523 · Filter by author jonrkarr opened on Apr 21, 2021