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over-representation-analysis

Here are 9 public repositories matching this topic...

moosa-r / rbioapi

rbioapi: User-Friendly R Interface to Biologic Web Services' API

cran bioinformatics enrichment r string biology api-client rstats uniprot reactome enrichment-analysis jaspar panther enrichr over-representation-analysis rstats-package mieaa

Updated Sep 26, 2026
R

gencorefacility / r-notebooks

Gene Set Enrichment Analysis and Over Representation Analysis analysis using R

bioinformatics genomics gsea over-representation-analysis gene-set-enrichment-analysis

Updated Jun 20, 2019

nasqar / ClusterProfShinyORA

A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries

visualization bioinformatics r shiny web-application shiny-apps geneset-enrichment kegg kegg-pathway over-representation-analysis

Updated Jan 22, 2020
R

DBRetina / DBRetina

gene gene-sets genes pathways gene-set-enrichment deduplication enrichment-analysis ora gsea set-cover over-representation-analysis

Updated Jul 9, 2026
Jupyter Notebook

paolomaccallini-hub / GeNetME

Gene-Network meta-analysis for ME/CFS

kegg gene-network reactome-pathway over-representation-analysis decodeme chronic-fatigue-syndrome myalgic-encephalomyelitis precision-life

Updated Jul 27, 2026
R

bmascat / lfq-proteomics-pipeline

All code, bash scrypts and pipelines used to analyse and visualise proteomic data from my experiments with my first Crispr KO model.

bioinformatics proteomics goterm over-representation-analysis proteomics-data-analysis

Updated Aug 21, 2022
R

hunglin59638 / leo

Leo is a web-based toolkit for Laboratory of Animal Proteomics in the department of Animal Science, National Chung Hsing University

go bioinformatics statistics kegg over-representation-analysis

Updated Jul 16, 2025
R

bmascat / phosphoproteomics-pipeline

Phosphoproteomic analysis of ALMS1 and BBS1 gene knockout fibroblasts for the study of the TGF-B pathway.

crispr phosphoproteomics network-diffusion enrichment-analysis random-walk-with-restart differential-expression-analysis protein-protein-interaction-network over-representation-analysis

Updated Sep 8, 2022
R

CCBR / l2p

List to pathway, or l2p, is an R package for gene set enrichment analysis that is optimized for speed.

c r-package functional-enrichment-analysis over-representation-analysis l2p

Updated Jun 22, 2026
C

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