Issues

• How to correct the trees which are not working?

  xflouris/newick-tools#20 · Filter by author prakriti19439 opened on Jul 4, 2024

• Generate all rooted binary topologies

  enhancement
  xflouris/newick-tools#18 · Filter by author Pas-Kapli opened on May 23, 2017

• --utree_all problem

  bug
  xflouris/newick-tools#17 · Filter by author Pas-Kapli opened on Jan 30, 2017

• prune tips by name suffix or prefix

  xflouris/newick-tools#16 · Filter by author Pas-Kapli opened on Dec 9, 2016

• Unroot trees

  xflouris/newick-tools#15 · Filter by author Pas-Kapli opened on Dec 9, 2016

• Generalize code with ntree structure

  enhancement
  xflouris/newick-tools#14 · Filter by author xflouris opened on Dec 8, 2016
  

• Allow for specific tip labels when generating random trees

  enhancement
  xflouris/newick-tools#13 · Filter by author xflouris opened on Dec 6, 2016
  

• Add attach option for trees

  xflouris/newick-tools#12 · Filter by author xflouris opened on Dec 6, 2016

• Simulate trees under the constant-rate birth-death process

  xflouris/newick-tools#11 · Filter by author xflouris opened on Dec 6, 2016
  

• create random constrained topologies

  enhancement
  xflouris/newick-tools#10 · Filter by author Pas-Kapli opened on Dec 1, 2016
  1

• Force binary tree

  xflouris/newick-tools#9 · Filter by author rebzzy opened on Nov 5, 2015
  1

• Main functions description

  xflouris/newick-tools#8 · Filter by author Pas-Kapli opened on Oct 28, 2015

• monophyletic clades of a tree

  enhancement
  xflouris/newick-tools#7 · Filter by author Pas-Kapli opened on Oct 1, 2015
  1

  

• Create a wiki page with documentation

  documentation
  xflouris/newick-tools#3 · Filter by author xflouris opened on Jul 28, 2015
  

• Enable --extract_* for unrooted trees

  enhancement
  xflouris/newick-tools#2 · Filter by author xflouris opened on Jul 28, 2015
  

• Test with CLANG and fix warnings

  bug
  xflouris/newick-tools#1 · Filter by author xflouris opened on Jul 28, 2015