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@Benson-Genomics-Lab

Benson-Genomics-Lab

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  1. TRF TRF Public

    Tandem Repeats Finder: a program to analyze DNA sequences

    C 219 36

  2. IRF IRF Public

    Inverted Repeats Finder: a program to analyze DNA and RNA sequences

    C 22 8

  3. Bitwise-Edit-Distance-Unit-Cost-15-Operations Bitwise-Edit-Distance-Unit-Cost-15-Operations Public

    This repository contains code for bitwise unit cost edit distance in 15 bit, logic, and addition operations.

    C 3

  4. VNTRseek VNTRseek Public

    VNTRSeek is a computational pipeline for the detection of VNTRs in short read sequencing data. It was developed by Yevgeniy Gelfand, Yozen Hernandez, and Gary Benson, with contributions from Marzie…

    C 2 2

Repositories

Showing 4 of 4 repositories
  • VNTRseek Public

    VNTRSeek is a computational pipeline for the detection of VNTRs in short read sequencing data. It was developed by Yevgeniy Gelfand, Yozen Hernandez, and Gary Benson, with contributions from Marzie Rasekh, and more recently streamlined by Kyler Anderson in the Benson Lab for Biocomputing and Informatics at Boston University.

    Benson-Genomics-Lab/VNTRseek's past year of commit activity
    C 2 GPL-3.0 2 13 0 Updated Jul 27, 2026
  • IRF Public

    Inverted Repeats Finder: a program to analyze DNA and RNA sequences

    Benson-Genomics-Lab/IRF's past year of commit activity
    C 22 AGPL-3.0 8 1 1 Updated Feb 21, 2025
  • Bitwise-Edit-Distance-Unit-Cost-15-Operations Public

    This repository contains code for bitwise unit cost edit distance in 15 bit, logic, and addition operations.

    Benson-Genomics-Lab/Bitwise-Edit-Distance-Unit-Cost-15-Operations's past year of commit activity
    C 3 AGPL-3.0 0 0 0 Updated Sep 12, 2023
  • TRF Public

    Tandem Repeats Finder: a program to analyze DNA sequences

    Benson-Genomics-Lab/TRF's past year of commit activity
    C 219 AGPL-3.0 36 34 1 Updated Jan 16, 2023

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