Skip to content

Add conda/mamba installation instructions and bioconda badge to README - #538

Merged
pvandyken merged 2 commits into
mainfrom
copilot/add-installation-instructions
Mar 13, 2026
Merged

pvandyken merged 2 commits into
mainfrom
copilot/add-installation-instructions

Conversation

Copilot AI commented Mar 13, 2026 •

Copy link
Copy Markdown
Contributor

Snakebids is available on bioconda but the README only documented pip installation, leaving conda/mamba users without guidance.

Changes

  • README.md: Added conda and mamba install commands to the Installation section using the standard bioconda channel setup (-c conda-forge -c bioconda)
  • README.md: Added bioconda version badge linking to the snakebids bioconda package page
conda install -c conda-forge -c bioconda snakebids
# or
mamba install -c conda-forge -c bioconda snakebids
Original prompt

This section details on the original issue you should resolve

<issue_title>Instructions to install with conda/mamba</issue_title>
<issue_description>Maybe it is in the todo list but there are no instructions in the documentation and README.md in how to install sankebids with conda/mamba.

mamba install snakebids -c bioconda

Best,

Ricardo</issue_description>

Comments on the Issue (you are @copilot in this section)


📍 Connect Copilot coding agent with Jira, Azure Boards or Linear to delegate work to Copilot in one click without leaving your project management tool.

Co-authored-by: pvandyken <87136354+pvandyken@users.noreply.github.com>
Copilot AI changed the title [WIP] Add instructions to install with conda/mamba Add conda/mamba installation instructions and bioconda badge to README Mar 13, 2026
Copilot AI requested a review from pvandyken March 13, 2026 18:53
@pvandyken
pvandyken marked this pull request as ready for review March 13, 2026 19:01
@github-actions
github-actions Bot requested a review from akhanf March 13, 2026 19:01
@pvandyken pvandyken added the documentation Improvements or additions to documentation label Mar 13, 2026
@pvandyken
pvandyken merged commit 1d97fee into main Mar 13, 2026
7 checks passed
@pvandyken
pvandyken deleted the copilot/add-installation-instructions branch March 13, 2026 20:25
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

documentation Improvements or additions to documentation

Projects

None yet

Development

Successfully merging this pull request may close these issues.

Instructions to install with conda/mamba

2 participants